6ZZZ
Crystal structure of yeast Sec62 cytoplasmic domain
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE BM02 |
Synchrotron site | ESRF |
Beamline | BM02 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-05-19 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.97958 |
Spacegroup name | P 65 2 2 |
Unit cell lengths | 99.206, 99.206, 155.657 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 47.260 - 2.540 |
R-factor | 0.2225 |
Rwork | 0.221 |
R-free | 0.25980 |
Structure solution method | SAD |
RMSD bond length | 0.013 |
RMSD bond angle | 1.729 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHENIX |
Refinement software | PHENIX (1.17.1_3660) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 47.260 | 2.630 |
High resolution limit [Å] | 2.540 | 2.540 |
Rmerge | 0.107 | 1.869 |
Rmeas | 0.109 | 1.894 |
Rpim | 0.018 | |
Number of reflections | 15563 | 1495 |
<I/σ(I)> | 26.56 | 2.03 |
Completeness [%] | 99.8 | |
Redundancy | 38.1 | |
CC(1/2) | 1.000 | 0.949 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 277 | 100mM MES pH 5.7-5.9, 2 M (NH4)2SO4 |