6ZFM
Structure of alpha-Cobratoxin with a peptide inhibitor
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PETRA III, EMBL c/o DESY BEAMLINE P13 (MX1) |
Synchrotron site | PETRA III, EMBL c/o DESY |
Beamline | P13 (MX1) |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-12-05 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.976200 |
Spacegroup name | P 61 |
Unit cell lengths | 49.438, 49.438, 289.629 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 27.645 - 1.900 |
R-factor | 0.2027 |
Rwork | 0.201 |
R-free | 0.23030 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1ntn |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (1.13_2998) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 27.645 | 1.710 |
High resolution limit [Å] | 1.680 | 1.680 |
Number of reflections | 45445 | 2353 |
<I/σ(I)> | 9.2 | |
Completeness [%] | 100.0 | |
Redundancy | 9.6 | |
CC(1/2) | 0.969 | 0.515 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 293 | 0.1 M Carboxylic acids (sodium formate / ammonium acetate / sodium citrate / sodium potassium tartrate / sodium oxamate), 0.1 M HEPES / MOPS pH7.5, 30.0 % v/v PEG 500 MME / PEG 20000 |