6ZCQ
SYK Kinase domain in complex with diamine inhibitor 5
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SOLEIL BEAMLINE PROXIMA 1 |
Synchrotron site | SOLEIL |
Beamline | PROXIMA 1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-05-01 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 40.140, 85.640, 90.280 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 45.140 - 2.320 |
R-factor | 0.191 |
Rwork | 0.189 |
R-free | 0.24400 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6ss8 |
RMSD bond length | 0.010 |
RMSD bond angle | 1.080 |
Data reduction software | Aimless |
Data scaling software | Aimless (0.5.32) |
Phasing software | AMoRE |
Refinement software | BUSTER (2.11.6) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 45.140 | 2.380 |
High resolution limit [Å] | 2.320 | 2.320 |
Rmerge | 0.070 | 0.432 |
Rmeas | 0.077 | 0.474 |
Rpim | 0.031 | 0.192 |
Total number of observations | 85613 | |
Number of reflections | 13975 | 961 |
<I/σ(I)> | 17.3 | |
Completeness [%] | 99.4 | 93.2 |
Redundancy | 6.1 | 5.9 |
CC(1/2) | 0.998 | 0.939 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 278 | 0.1M Na3Cit pH 6.4, 16% PEG3350, 0.2M KH2PO4 |