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6ZA1

Structure of [NiFeSe] hydrogenase G491A variant from Desulfovibrio vulgaris Hildenborough pressurized with Oxygen gas - structure G491A-O2-hd

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE ID30B
Synchrotron siteESRF
BeamlineID30B
Temperature [K]100
Detector technologyPIXEL
Collection date2018-04-08
DetectorDECTRIS PILATUS3 6M
Wavelength(s)0.97625
Spacegroup nameC 1 2 1
Unit cell lengths106.156, 63.415, 110.044
Unit cell angles90.00, 104.78, 90.00
Refinement procedure
Resolution50.950 - 1.370
R-factor0.1441
Rwork0.143
R-free0.16300
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5jsk
RMSD bond length0.005
RMSD bond angle1.268
Data reduction softwareXDS
Data scaling softwareSTARANISO
Phasing softwarePHASER
Refinement softwarePHENIX (1.18.2_3874)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]104.4001.480
High resolution limit [Å]1.3701.370
Rmerge0.0520.625
Rpim0.0420.459
Number of reflections1153125766
<I/σ(I)>9.81.5
Completeness [%]77.8
Redundancy2.3
CC(1/2)0.9940.566
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7.629320% PEG 1500 (w/v) and 0.1 mM Tris-HCl pH 7.6

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