6ZA1
Structure of [NiFeSe] hydrogenase G491A variant from Desulfovibrio vulgaris Hildenborough pressurized with Oxygen gas - structure G491A-O2-hd
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | ESRF BEAMLINE ID30B |
| Synchrotron site | ESRF |
| Beamline | ID30B |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2018-04-08 |
| Detector | DECTRIS PILATUS3 6M |
| Wavelength(s) | 0.97625 |
| Spacegroup name | C 1 2 1 |
| Unit cell lengths | 106.156, 63.415, 110.044 |
| Unit cell angles | 90.00, 104.78, 90.00 |
Refinement procedure
| Resolution | 50.950 - 1.370 |
| R-factor | 0.1441 |
| Rwork | 0.143 |
| R-free | 0.16300 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 5jsk |
| RMSD bond length | 0.005 |
| RMSD bond angle | 1.268 |
| Data reduction software | XDS |
| Data scaling software | STARANISO |
| Phasing software | PHASER |
| Refinement software | PHENIX (1.18.2_3874) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 104.400 | 1.480 |
| High resolution limit [Å] | 1.370 | 1.370 |
| Rmerge | 0.052 | 0.625 |
| Rpim | 0.042 | 0.459 |
| Number of reflections | 115312 | 5766 |
| <I/σ(I)> | 9.8 | 1.5 |
| Completeness [%] | 77.8 | |
| Redundancy | 2.3 | |
| CC(1/2) | 0.994 | 0.566 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 7.6 | 293 | 20% PEG 1500 (w/v) and 0.1 mM Tris-HCl pH 7.6 |






