6Z2Z
M2 mutant (R111K:Y134F:T54V:R132Q:P39Y:R59Y) of human cellular retinoic acid binding protein II - 2a conjugate
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I03 |
Synchrotron site | Diamond |
Beamline | I03 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-03-03 |
Detector | DECTRIS EIGER2 XE 16M |
Wavelength(s) | 0.97625 |
Spacegroup name | P 31 2 1 |
Unit cell lengths | 58.794, 58.794, 101.152 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 50.920 - 2.550 |
R-factor | 0.2078 |
Rwork | 0.205 |
R-free | 0.26500 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4yfp |
RMSD bond length | 0.012 |
RMSD bond angle | 1.679 |
Data reduction software | XDS |
Data scaling software | SCALA |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0258) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 101.150 | 2.690 |
High resolution limit [Å] | 2.550 | 2.550 |
Rmerge | 0.060 | 0.454 |
Rmeas | 0.064 | 0.485 |
Rpim | 0.023 | 0.170 |
Number of reflections | 6999 | 986 |
<I/σ(I)> | 16.6 | 3.5 |
Completeness [%] | 100.0 | 100 |
Redundancy | 7.9 | 8 |
CC(1/2) | 0.997 | 0.948 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 281 | 0.2 M sodium malonate pH 7 and 20% w/v polyethylene glycol 3,350 |