6YYJ
Crystal structure of native Phycocyanin from T. elongatus in spacegroup P21212 at 2.1 Angstroms
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PETRA III, DESY BEAMLINE P11 |
Synchrotron site | PETRA III, DESY |
Beamline | P11 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-12-03 |
Detector | DECTRIS PILATUS3 S 6M |
Wavelength(s) | 1.0332 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 118.363, 98.231, 104.600 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 47.840 - 2.160 |
R-factor | 0.206 |
Rwork | 0.204 |
R-free | 0.25820 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6ypq |
RMSD bond length | 0.013 |
RMSD bond angle | 1.541 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.17.1_3660) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 47.840 | 2.210 |
High resolution limit [Å] | 2.160 | 2.160 |
Rmerge | 0.230 | 2.873 |
Rmeas | 0.268 | 3.338 |
Rpim | 0.098 | 1.217 |
Number of reflections | 66066 | 6450 |
<I/σ(I)> | 7 | 0.7 |
Completeness [%] | 99.8 | 99 |
Redundancy | 7.4 | |
CC(1/2) | 0.994 | 0.263 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 293 | 1,2% Cholic Acid derivatives mix, 0.1M Buffer System1, 50% precipitant Mix1 |