6YVC
Crystal structure of the small alarmone hydrolase (SAH) of Pseudomonas aeruginosa
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID29 |
Synchrotron site | ESRF |
Beamline | ID29 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-04-10 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.072 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 85.330, 85.380, 122.170 |
Unit cell angles | 90.00, 102.06, 90.00 |
Refinement procedure
Resolution | 45.780 - 1.850 |
R-factor | 0.1928 |
Rwork | 0.191 |
R-free | 0.22190 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5xnx |
RMSD bond length | 0.005 |
RMSD bond angle | 0.737 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHENIX (1.17.1_3660) |
Refinement software | PHENIX (1.17.1_3660) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 45.780 | 1.920 |
High resolution limit [Å] | 1.850 | 1.850 |
Rmerge | 0.147 | 0.622 |
Number of reflections | 72548 | 7192 |
<I/σ(I)> | 8.09 | 1.92 |
Completeness [%] | 99.1 | |
Redundancy | 3.7 | |
CC(1/2) | 0.990 | 0.690 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 294 | 2.0 M sodium formate and 0.1 M sodium acetate pH 4.6 |