6YUD
Structure of Csx3/Crn3 from Archaeoglobus fulgidus in complex with cyclic tetra-adenylate (cA4)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04 |
Synchrotron site | Diamond |
Beamline | I04 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-09-29 |
Detector | DECTRIS EIGER2 XE 16M |
Wavelength(s) | 0.9795 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 193.969, 60.364, 107.085 |
Unit cell angles | 90.00, 116.47, 90.00 |
Refinement procedure
Resolution | 53.560 - 1.840 |
R-factor | 0.1947 |
Rwork | 0.192 |
R-free | 0.23720 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3wzi |
RMSD bond length | 0.008 |
RMSD bond angle | 1.623 |
Data reduction software | xia2 (0.5.900-ga3de5862-dials-1.14) |
Data scaling software | Aimless (0.7.4) |
Phasing software | PHASER (2.7.17) |
Refinement software | REFMAC (5.8.0258) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 53.560 | 53.560 | 1.890 |
High resolution limit [Å] | 1.840 | 8.230 | 1.840 |
Rmerge | 0.044 | 0.029 | 0.724 |
Rmeas | 0.053 | 0.035 | 0.913 |
Rpim | 0.029 | 0.019 | 0.547 |
Total number of observations | 302768 | 3937 | 12833 |
Number of reflections | 93596 | 1160 | 5287 |
<I/σ(I)> | 11.3 | 46 | 1.1 |
Completeness [%] | 97.1 | 99.6 | 74.5 |
Redundancy | 3.2 | 3.4 | 2.4 |
CC(1/2) | 0.995 | 0.976 | 0.739 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 300 | 100mM Hepes 25% (v/v) Jeffamine M-600 |