6YQZ
N-terminal domain of BRD4 with biphenyl-methyamino-dimethylpyridazinone
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID29 |
Synchrotron site | ESRF |
Beamline | ID29 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2012-11-28 |
Detector | DECTRIS PILATUS 2M |
Wavelength(s) | 0.97625 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 37.940, 44.370, 78.050 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 39.030 - 1.390 |
R-factor | 0.1732 |
Rwork | 0.172 |
R-free | 0.20370 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | In house structure |
RMSD bond length | 0.004 |
RMSD bond angle | 1.194 |
Data reduction software | XDS |
Data scaling software | SCALA (3.3.20) |
Refinement software | REFMAC (5.8.0257) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 39.030 | 39.025 | 1.470 |
High resolution limit [Å] | 1.390 | 4.400 | 1.390 |
Rmerge | 0.063 | 0.513 | |
Rmeas | 0.094 | 0.070 | 0.619 |
Rpim | 0.043 | 0.031 | 0.338 |
Total number of observations | 4345 | 10608 | |
Number of reflections | 26727 | 960 | 3684 |
<I/σ(I)> | 9 | 20 | 1.9 |
Completeness [%] | 98.5 | 99.1 | 95.2 |
Redundancy | 4.1 | 4.5 | 2.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 298 | 20%w/v PEG 3350, 0.2M sodium sulphate,0.1M bis-tris-propane (pH 6.5) |