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6YPY

14-3-3 sigma with RelA/p65 binding site pS45 and covalently bound TCF521-123

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I24
Synchrotron siteDiamond
BeamlineI24
Temperature [K]100
Detector technologyPIXEL
Collection date2019-04-18
DetectorDECTRIS PILATUS3 6M
Wavelength(s)0.96862
Spacegroup nameC 2 2 21
Unit cell lengths82.598, 112.444, 62.555
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution34.465 - 1.400
R-factor0.1723
Rwork0.171
R-free0.19250
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)6qhl
RMSD bond length0.009
RMSD bond angle1.063
Data reduction softwareDIALS
Data scaling softwareAimless (0.7.2)
Phasing softwareMOLREP
Refinement softwarePHENIX (1.12_2829)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]56.22056.2201.420
High resolution limit [Å]1.4007.6701.400
Rmerge0.0460.0460.157
Rmeas0.0650.0640.223
Rpim0.0460.0460.157
Total number of observations6795448
Number of reflections575494082797
<I/σ(I)>11.116.94.3
Completeness [%]100.099.7100
Redundancy1.91.71.9
CC(1/2)0.9930.9860.922
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7.12770.095 M HEPES Na pH 7.1, 27% PEG400, 0.19M Calcium chloride, 5% Glycerol

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PDB entries from 2024-05-15

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