6YLT
Translation initiation factor 4E in complex with 3-MeBn7GpppG mRNA 5' cap analog
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | BESSY BEAMLINE 14.1 |
Synchrotron site | BESSY |
Beamline | 14.1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-01-19 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.9184 |
Spacegroup name | P 1 |
Unit cell lengths | 38.300, 38.330, 148.760 |
Unit cell angles | 83.99, 87.78, 76.81 |
Refinement procedure
Resolution | 49.310 - 2.670 |
R-factor | 0.2021 |
Rwork | 0.200 |
R-free | 0.24620 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1l8b |
RMSD bond length | 0.008 |
RMSD bond angle | 0.934 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHENIX |
Refinement software | PHENIX (1.17.1_3660) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 49.310 | 2.766 |
High resolution limit [Å] | 2.670 | 2.670 |
Rmerge | 0.134 | 0.616 |
Rmeas | 0.155 | 0.730 |
Rpim | 0.078 | 0.383 |
Number of reflections | 23009 | 2275 |
<I/σ(I)> | 9.76 | 2.01 |
Completeness [%] | 98.9 | 96.77 |
Redundancy | 3.8 | 3.4 |
CC(1/2) | 0.990 | 0.673 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.5 | 291 | 0.1 M sodium citrate tribasic pH 5.5, 20 % w/v PEG 3350 |