6YL1
Cdk2(F80C) with Covalent Adduct TK37 at F80C
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04-1 |
Synchrotron site | Diamond |
Beamline | I04-1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2018-06-23 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 0.9763 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 53.340, 71.240, 71.870 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 36.710 - 1.660 |
Rwork | 0.221 |
R-free | 0.26850 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4ek3 |
RMSD bond length | 0.007 |
RMSD bond angle | 0.972 |
Data reduction software | xia2 |
Data scaling software | xia2 |
Phasing software | PHASER |
Refinement software | PHENIX (1.17.1_3660) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 36.710 | 1.719 |
High resolution limit [Å] | 1.660 | 1.660 |
Rmerge | 0.062 | |
Number of reflections | 32900 | 3244 |
<I/σ(I)> | 7.81 | |
Completeness [%] | 99.6 | |
Redundancy | 2 | |
CC(1/2) | 0.995 | 0.488 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | Protein: 8 mg/mL in pH 6.2 phosphate buffer Resovoir: 8-12% PEG3350, HEPES 0.1 M (pH 7.5-8.5) 1:1 |