6YK2
Structure of the AMPA receptor GluA2o ligand-binding domain (S1S2J) in complex with the compound (S)-1-[2'-Amino-2'-carboxyethyl]-5,7-dihydrothieno[3,4-d]pyrimidin- 2,4(1H,3H)-dione at resolution 1.60A
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | BESSY BEAMLINE 14.1 |
Synchrotron site | BESSY |
Beamline | 14.1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2005-11-25 |
Detector | MARRESEARCH |
Wavelength(s) | 1.07270 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 59.274, 96.530, 48.711 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 35.063 - 1.612 |
R-factor | 0.1461 |
Rwork | 0.145 |
R-free | 0.16280 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1syh |
Data reduction software | MOSFLM |
Data scaling software | SCALA (3.2.5) |
Phasing software | REFMAC |
Refinement software | PHENIX (1.13_2998) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 37.424 | 37.424 | 1.690 |
High resolution limit [Å] | 1.612 | 5.060 | 1.612 |
Rmerge | 0.038 | 0.029 | 0.107 |
Rmeas | 0.046 | 0.036 | 0.134 |
Total number of observations | 99021 | ||
Number of reflections | 35934 | 1160 | 4164 |
<I/σ(I)> | 18.6 | 21.2 | 4.9 |
Completeness [%] | 95.8 | 90 | 77.2 |
Redundancy | 2.8 | 2.7 | 2.5 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.5 | 279 | 15% PEG4000, 0.3M Lithium Sulfate, 0.1M acetate |