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6YIG

Crystal structure of the N-terminal EF-hand domain of Arabidopsis thaliana AtEH1/Pan1

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsPETRA III, EMBL c/o DESY BEAMLINE P14 (MX2)
Synchrotron sitePETRA III, EMBL c/o DESY
BeamlineP14 (MX2)
Temperature [K]100
Detector technologyPIXEL
Collection date2019-09-29
DetectorDECTRIS EIGER X 16M
Wavelength(s)1.033
Spacegroup nameP 21 21 21
Unit cell lengths35.510, 38.620, 63.520
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution33.000 - 1.550
R-factor0.1459
Rwork0.145
R-free0.16400
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2qpt
RMSD bond length0.008
RMSD bond angle0.931
Data reduction softwareXDS (20180409)
Data scaling softwareXSCALE (20180409)
Phasing softwareMoRDa
Refinement softwarePHENIX (1.17.1_3660)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]33.00033.0001.590
High resolution limit [Å]1.5506.9301.550
Rmeas0.0520.0290.387
Number of reflections237592731451
<I/σ(I)>22.8863.433.4
Completeness [%]97.210081.4
Redundancy7.478.743.64
CC(1/2)0.9990.9990.919
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7.3293100mM HEPES pH 7.6, 0.8M SodiumMalonate, 0.5% Jeffamine

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PDB entries from 2024-05-15

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