6YGQ
EclA N-terminal domain; PllA-like lectin
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06DA |
Synchrotron site | SLS |
Beamline | X06DA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-02-25 |
Detector | DECTRIS PILATUS 2M-F |
Wavelength(s) | 1.00003 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 65.793, 50.461, 73.859 |
Unit cell angles | 90.00, 109.36, 90.00 |
Refinement procedure
Resolution | 40.870 - 1.900 |
R-factor | 0.1829 |
Rwork | 0.181 |
R-free | 0.22380 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5ofz |
RMSD bond length | 0.003 |
RMSD bond angle | 0.621 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHENIX |
Refinement software | PHENIX (1.16_3549) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 40.870 | 1.940 |
High resolution limit [Å] | 1.900 | 1.900 |
Number of reflections | 36259 | 2350 |
<I/σ(I)> | 8 | |
Completeness [%] | 99.9 | |
Redundancy | 3.4 | |
CC(1/2) | 0.997 | 0.881 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 291 | 0.06 M divalents (magnesium chloride hexahydrate and calcium chloride dihydrate), 0.1 M Tris and bicine, pH 8.5, (40% v/v) glycerol, 20% w/v PEG 4000 |