6YE1
Human Ecto-5'-nucleotidase (CD73) in complex with the AMPCP derivative A894 (compound 2n in publication) in the closed form (crystal form IV)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | BESSY BEAMLINE 14.1 |
Synchrotron site | BESSY |
Beamline | 14.1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-06-23 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.91840 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 93.030, 232.120, 53.790 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 46.520 - 2.660 |
R-factor | 0.197 |
Rwork | 0.193 |
R-free | 0.26800 |
Structure solution method | FOURIER SYNTHESIS |
Starting model (for MR) | 4h2i |
RMSD bond length | 0.010 |
RMSD bond angle | 1.220 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | BUSTER |
Refinement software | BUSTER (2.10.3) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 46.520 | 46.520 | 2.820 |
High resolution limit [Å] | 2.660 | 7.880 | 2.660 |
Rmerge | 0.253 | 0.049 | 0.867 |
Rmeas | 0.275 | 0.054 | 0.943 |
Total number of observations | 224786 | ||
Number of reflections | 34420 | 1459 | 5435 |
<I/σ(I)> | 6.99 | 25.02 | 1.95 |
Completeness [%] | 99.6 | 98.6 | 98.9 |
Redundancy | 6.531 | 5.811 | 6.515 |
CC(1/2) | 0.991 | 0.999 | 0.487 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 291 | 1mM of compound, 0.1 mM ZnCl2, 11-14% PEG6000, 100 mM sodium citrate pH 5.4-5.6, 15% glycerol for cryo |