6Y6A

Structure of Finch Polyomavirus VP1 in complex with 2-O-Methyl-5-N-acetyl-alpha-D-neuraminic acid

Experimental procedure

Experimental method	SINGLE WAVELENGTH
Source type	SYNCHROTRON
Source details	SLS BEAMLINE X06DA
Synchrotron site	SLS
Beamline	X06DA
Temperature [K]	93
Detector technology	PIXEL
Collection date	2018-06-14
Detector	DECTRIS PILATUS 2M-F
Wavelength(s)	0.99986
Spacegroup name	P 1
Unit cell lengths	86.496, 172.063, 245.616
Unit cell angles	107.09, 97.93, 93.93

Refinement procedure

Resolution	49.940 - 2.650
R-factor	0.2448
Rwork	0.245
R-free	0.26670
Structure solution method	MOLECULAR REPLACEMENT
Starting model (for MR)	4fmg
RMSD bond length	0.006
RMSD bond angle	1.343
Data reduction software	XDS
Data scaling software	XDS
Phasing software	PHASER
Refinement software	REFMAC (5.8.0253)

Data quality characteristics

	Overall	Outer shell
Low resolution limit [Å]	49.950	2.810
High resolution limit [Å]	2.650	2.650
Rmeas	0.271	1.130
Number of reflections	377799	13276
<I/σ(I)>	4.64	1.12
Completeness [%]	94.7	96.4
Redundancy	2.7	2.77
CC(1/2)	0.976	0.520

Crystallization Conditions

crystal ID	method	pH	temperature	details
1	VAPOR DIFFUSION, HANGING DROP	7	277	Magnesium chloride, TRIS, PEG 8000