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6Y31

NG domain of human SRP54 T117 deletion mutant

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE ID23-1
Synchrotron siteESRF
BeamlineID23-1
Temperature [K]100
Detector technologyPIXEL
Collection date2018-06-04
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.972
Spacegroup nameP 1 21 1
Unit cell lengths87.356, 50.607, 181.629
Unit cell angles90.00, 99.39, 90.00
Refinement procedure
Resolution45.724 - 4.001
R-factor0.3124
Rwork0.311
R-free0.33120
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)6y2z
Data reduction softwareAimless
Data scaling softwareAimless
Phasing softwarePHENIX
Refinement softwarePHENIX (1.13_2998)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]45.7244.140
High resolution limit [Å]4.0004.000
Rpim0.2131.250
Number of reflections136301343
<I/σ(I)>2.27
Completeness [%]94.6
Redundancy6.6
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP291.150.8 M Na2HPO4 , 0.8 M K2HPO4 HEPES 0.1 M (pH 7.5)

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PDB entries from 2024-05-15

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