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6Y0M

Crystal structure of human CD23 lectin domain N225D, K229E, S252N, T251N mutant

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I04-1
Synchrotron siteDiamond
BeamlineI04-1
Temperature [K]100
Detector technologyCCD
Collection date2014-07-07
DetectorADSC QUANTUM 315
Wavelength(s)0.92
Spacegroup nameP 6 2 2
Unit cell lengths115.186, 115.186, 45.752
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution49.877 - 1.500
R-factor0.1705
Rwork0.168
R-free0.21190
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4g9a
RMSD bond length0.013
RMSD bond angle1.316
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwarePHENIX ((1.13_2998: ???))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]49.8801.530
High resolution limit [Å]1.5001.500
Rmerge0.109
Rpim0.0180.538
Number of reflections29150
<I/σ(I)>24.71.7
Completeness [%]99.999.7
Redundancy3935.5
CC(1/2)0.9980.808
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP6.52910.1M sodium-cacodylate pH 6.5, 1M tri-sodium-citrate Crystals were soaked with a solution of 0.1M sodium-cacodylate at pH 7.1, 1.4M tri-sodium-citrate and 10mM CaCl2 for four days before harvesting which also served as a cryoprotectant.

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