6Y0M
Crystal structure of human CD23 lectin domain N225D, K229E, S252N, T251N mutant
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | DIAMOND BEAMLINE I04-1 |
| Synchrotron site | Diamond |
| Beamline | I04-1 |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2014-07-07 |
| Detector | ADSC QUANTUM 315 |
| Wavelength(s) | 0.92 |
| Spacegroup name | P 6 2 2 |
| Unit cell lengths | 115.186, 115.186, 45.752 |
| Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
| Resolution | 49.877 - 1.500 |
| R-factor | 0.1705 |
| Rwork | 0.168 |
| R-free | 0.21190 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 4g9a |
| RMSD bond length | 0.013 |
| RMSD bond angle | 1.316 |
| Data reduction software | XDS |
| Data scaling software | Aimless |
| Phasing software | PHASER |
| Refinement software | PHENIX ((1.13_2998: ???)) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 49.880 | 1.530 |
| High resolution limit [Å] | 1.500 | 1.500 |
| Rmerge | 0.109 | |
| Rpim | 0.018 | 0.538 |
| Number of reflections | 29150 | |
| <I/σ(I)> | 24.7 | 1.7 |
| Completeness [%] | 99.9 | 99.7 |
| Redundancy | 39 | 35.5 |
| CC(1/2) | 0.998 | 0.808 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 291 | 0.1M sodium-cacodylate pH 6.5, 1M tri-sodium-citrate Crystals were soaked with a solution of 0.1M sodium-cacodylate at pH 7.1, 1.4M tri-sodium-citrate and 10mM CaCl2 for four days before harvesting which also served as a cryoprotectant. |






