6XZK
Structure of zVDR LBD-Calcitriol in complex with chimera 13
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID30B |
Synchrotron site | ESRF |
Beamline | ID30B |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-09-05 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.98 |
Spacegroup name | P 65 2 2 |
Unit cell lengths | 66.112, 66.112, 262.488 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 14.931 - 2.000 |
R-factor | 0.2023 |
Rwork | 0.201 |
R-free | 0.22350 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2hc4 |
RMSD bond length | 0.003 |
RMSD bond angle | 0.708 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHENIX |
Refinement software | PHENIX (1.10.1_2155) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 14.931 | 2.070 |
High resolution limit [Å] | 2.000 | 2.000 |
Rpim | 0.013 | 0.332 |
Number of reflections | 23222 | 1833 |
<I/σ(I)> | 16.04 | 3.32 |
Completeness [%] | 96.2 | 78.57 |
Redundancy | 1.2 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6 | 290 | Lithium sulfate 1.8 M, Mes 100 mM |