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6XYF

Nanobody 22

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsPETRA III, EMBL c/o DESY BEAMLINE P14 (MX2)
Synchrotron sitePETRA III, EMBL c/o DESY
BeamlineP14 (MX2)
Temperature [K]100
Detector technologyPIXEL
Collection date2015-05-30
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.948400
Spacegroup nameP 1 21 1
Unit cell lengths30.322, 38.685, 44.873
Unit cell angles90.00, 98.27, 90.00
Refinement procedure
Resolution30.006 - 1.111
Rwork0.125
R-free0.15280
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4i13.pdb
RMSD bond length0.009
RMSD bond angle1.089
Data reduction softwareXDS (ERSION Mar 15, 2019)
Data scaling softwareAimless (0.7.4)
Refinement softwarePHENIX (1.16-3549)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]30.01010.0001.130
High resolution limit [Å]1.1106.0901.110
Rmerge0.1300.0740.299
Rmeas0.1350.0770.321
Rpim0.0370.0220.111
Total number of observations495655
Number of reflections390572711095
<I/σ(I)>10.2
Completeness [%]96.399.655.3
Redundancy12.712.76.5
CC(1/2)0.9970.9960.936
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP2980.1 M Bis Tris Propane 100 mM Na/K Phosphate 30 % PEG 3350

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