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6XXG

Structure of truncated 1-deoxy-D-xylulose 5-phosphate synthase (DXS) from Deinococcus radiodurans

This is a non-PDB format compatible entry.
Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsPETRA III, DESY BEAMLINE P11
Synchrotron sitePETRA III, DESY
BeamlineP11
Temperature [K]100
Detector technologyPIXEL
Collection date2017-04-15
DetectorDECTRIS PILATUS 6M-F
Wavelength(s)1.0332
Spacegroup nameP 21 21 21
Unit cell lengths72.321, 87.367, 181.865
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution47.549 - 2.099
Rwork0.191
R-free0.23600
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2o1x
RMSD bond length0.006
RMSD bond angle1.402
Data reduction softwareXDS (VERSION Mar 15, 2019 BUILT=20190315)
Data scaling softwareXDS (VERSION Mar 15, 2019 BUILT=20190315)
Phasing softwareMOLREP (Vers 11.7.02; 29.05.2019)
Refinement softwareREFMAC (5.8.0253)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]47.5492.175
High resolution limit [Å]2.0992.100
Number of reflections679876677
<I/σ(I)>5.87
Completeness [%]99.199.48
Redundancy2
CC(1/2)0.9130.444
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP8.52930.2 M Calcium acetate hydrate, 0.1 M Tris, 20 % PEG 4000

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