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6XRU

GTP-specific succinyl-CoA synthetase complexed with desulfo-coenzyme A, magnesium ions and succinates

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALS BEAMLINE 5.0.2
Synchrotron siteALS
Beamline5.0.2
Temperature [K]100
Detector technologyPIXEL
Collection date2020-03-15
DetectorDECTRIS PILATUS3 6M
Wavelength(s)1.00000
Spacegroup nameP 1 21 1
Unit cell lengths86.041, 81.246, 50.386
Unit cell angles90.00, 104.59, 90.00
Refinement procedure
Resolution48.760 - 1.400
R-factor0.1698
Rwork0.169
R-free0.18420
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5cae
Data reduction softwarexia2
Data scaling softwarexia2
Phasing softwarePHASER
Refinement softwarePHENIX (dev_3885)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]48.7601.420
High resolution limit [Å]1.4001.400
Rmerge0.0490.990
Rpim0.0460.891
Number of reflections1307876088
<I/σ(I)>8.20.3
Completeness [%]99.393.1
Redundancy3
CC(1/2)0.9640.547
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP29420% (w/v) P3350, 100 mM MES pH 6.3, 120 mM ammonium succinate pH 7.0

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PDB entries from 2024-05-15

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