6XRJ
Crystal structure of the disulfide linked DH717.1 Fab dimer, derived from a macaque HIV-1 vaccine-induced Env glycan-reactive neutralizing antibody B cell lineage
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | APS BEAMLINE 22-BM |
| Synchrotron site | APS |
| Beamline | 22-BM |
| Temperature [K] | 193.15 |
| Detector technology | PIXEL |
| Collection date | 2018-03-03 |
| Detector | DECTRIS EIGER X 16M |
| Wavelength(s) | 1.0 |
| Spacegroup name | P 43 2 2 |
| Unit cell lengths | 201.587, 201.587, 154.327 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 41.710 - 3.150 |
| R-factor | 0.2464 |
| Rwork | 0.245 |
| R-free | 0.28220 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 5ukn |
| RMSD bond length | 0.012 |
| RMSD bond angle | 2.034 |
| Data reduction software | HKL-2000 |
| Data scaling software | HKL-2000 |
| Phasing software | PHASER |
| Refinement software | PHENIX (1.17.1_3660) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 41.710 | 3.260 |
| High resolution limit [Å] | 3.147 | 3.147 |
| Rmerge | 0.166 | |
| Number of reflections | 55412 | 5393 |
| <I/σ(I)> | 13.4 | 1.3 |
| Completeness [%] | 99.7 | 98.94 |
| Redundancy | 9 | 9.6 |
| CC(1/2) | 0.992 | 0.525 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 3.5 | 295.15 | 0.1M Citric acid pH3.5, 14% PEG 1000 |






