6XNL
GCN4-p1 Peptide Trimer with iodo-phenylalanine residue at position 16 (IPF-F16)
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | ALS BEAMLINE 4.2.2 |
| Synchrotron site | ALS |
| Beamline | 4.2.2 |
| Temperature [K] | 100 |
| Detector technology | CMOS |
| Collection date | 2018-01-09 |
| Detector | RDI CMOS_8M |
| Wavelength(s) | 0.83 |
| Spacegroup name | C 1 2 1 |
| Unit cell lengths | 59.069, 34.848, 46.712 |
| Unit cell angles | 90.00, 100.44, 90.00 |
Refinement procedure
| Resolution | 19.850 - 2.200 |
| R-factor | 0.2322 |
| Rwork | 0.222 |
| R-free | 0.32110 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 1swi |
| RMSD bond length | 0.008 |
| RMSD bond angle | 1.146 |
| Data reduction software | HKL-2000 |
| Data scaling software | Aimless |
| Phasing software | PHENIX |
| Refinement software | PHENIX (1.16_3549) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 19.850 | 2.280 |
| High resolution limit [Å] | 2.200 | 2.200 |
| Rmerge | 0.071 | 0.429 |
| Rmeas | 0.100 | 0.607 |
| Rpim | 0.071 | 0.429 |
| Number of reflections | 8716 | 695 |
| <I/σ(I)> | 14.32 | 2.67 |
| Completeness [%] | 97.9 | |
| Redundancy | 1.8 | |
| CC(1/2) | 0.986 | 0.462 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 7 | 298 | Crystallization drops were prepared by mixing 2 uL of stock peptide solution with 2 uL of mother liquor and allowed to equilibrate at 298 K over a well containing 500 uL of mother liquor. The stock peptide solution (total concentration 1.5 mM) was prepared by mixing 2:1 ratios of the A16 peptide with IPF-F16 in 10 mM potassium phosphate, 100 mM potassium chloride pH 7.0. |






