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6XMD

SM Protein Vps45 in Complex with Qa SNARE Tlg2 (1-310)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsNSLS-II BEAMLINE 17-ID-2
Synchrotron siteNSLS-II
Beamline17-ID-2
Temperature [K]100
Detector technologyPIXEL
Collection date2018-04-14
DetectorDECTRIS EIGER X 16M
Wavelength(s)0.97935
Spacegroup nameP 21 2 21
Unit cell lengths58.380, 89.434, 209.137
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution29.510 - 3.900
R-factor0.1932
Rwork0.191
R-free0.24250
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)6xjl
Data reduction softwareXDS
Data scaling softwareAimless (0.7.1)
Phasing softwarePHASER
Refinement softwarePHENIX (1.17_3644)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]29.51029.5104.340
High resolution limit [Å]3.8808.6703.880
Rmerge0.2460.0882.149
Rmeas0.2560.0922.234
Rpim0.0710.0270.603
Total number of observations1382671241738856
Number of reflections1065310402891
<I/σ(I)>6.927.51.3
Completeness [%]99.397.898.1
Redundancy1311.913.4
CC(1/2)0.9930.9900.649
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP2934 mg/ml protein in well buffer consisting of 0.125 M potassium citrate, 15 % (w/v) PEG 3350, 15% (v/v) glycerol, and 1 mM DTT

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PDB entries from 2024-05-15

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