6XKC
Crystal structure of E3 ligase
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | APS BEAMLINE 24-ID-C |
| Synchrotron site | APS |
| Beamline | 24-ID-C |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2019-03-15 |
| Detector | DECTRIS PILATUS3 6M |
| Wavelength(s) | 0.97890 |
| Spacegroup name | P 31 |
| Unit cell lengths | 97.003, 97.003, 148.341 |
| Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
| Resolution | 49.450 - 2.030 |
| R-factor | 0.219 |
| Rwork | 0.218 |
| R-free | 0.24200 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 5ma4 |
| RMSD bond length | 0.009 |
| RMSD bond angle | 1.020 |
| Data reduction software | HKL-3000 |
| Data scaling software | SCALEPACK |
| Phasing software | PHASER |
| Refinement software | BUSTER (2.10.3) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 50.000 | 50.000 | 2.070 |
| High resolution limit [Å] | 2.030 | 5.510 | 2.030 |
| Rmerge | 0.068 | 0.033 | 0.836 |
| Rmeas | 0.075 | 0.036 | 0.950 |
| Rpim | 0.032 | 0.015 | 0.441 |
| Total number of observations | 521083 | ||
| Number of reflections | 99464 | 5103 | 4194 |
| <I/σ(I)> | 11 | ||
| Completeness [%] | 97.6 | 99.8 | 82.1 |
| Redundancy | 5.2 | 5.8 | 3.6 |
| CC(1/2) | 0.999 | 0.599 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 7 | 291 | 16% Jeffamine M-600 pH 7.0 and 0.1 M HEPES 7.0 |
