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6XJ5

Carboxypeptidase G2 modified with a versatile bioconjugate for metalloprotein design

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 23-ID-D
Synchrotron siteAPS
Beamline23-ID-D
Temperature [K]93
Detector technologyPIXEL
Collection date2019-06-30
DetectorDECTRIS PILATUS3 6M
Wavelength(s)1.0332
Spacegroup nameP 1 21 1
Unit cell lengths72.120, 188.460, 124.500
Unit cell angles90.00, 90.17, 90.00
Refinement procedure
Resolution41.500 - 3.110
Rwork0.271
R-free0.30860
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1cg2
RMSD bond length0.003
RMSD bond angle1.144
Data reduction softwarexia2 (0.5.898-g5f4e2fb3-dials-1.14)
Data scaling softwarexia2 (0.5.898-g5f4e2fb3-dials-1.14)
Phasing softwarePHASER (2.8.3)
Refinement softwareREFMAC (5.8.0258)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]41.5003.160
High resolution limit [Å]3.1103.110
Rmerge0.3891.949
Rmeas0.4232.106
Rpim0.1640.793
Number of reflections595362967
<I/σ(I)>4.31.1
Completeness [%]99.999.93
Redundancy6.66.91
CC(1/2)0.9770.358
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7.5277Reservoir consisted of 750 uL of 0.2 M Tris pH 7.5, 10% PEG 3350, and 5% glycerol. 2 uL of reservoir solution was mixed with 2 uL of protein solution, consisting of 4.7 mg/mL CPG2 in 50 mM Tris 100 mM NaCl pH 7.4 supplemented with 0.1 M ZnSO4

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PDB entries from 2024-05-15

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