6XEE
Crystal Structure of the PTP1B YopH WPD loop Chimera 4 apo form
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | SSRL BEAMLINE BL9-1 |
| Synchrotron site | SSRL |
| Beamline | BL9-1 |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2019-01-31 |
| Detector | ADSC QUANTUM 315r |
| Wavelength(s) | 0.97946 |
| Spacegroup name | P 31 2 1 |
| Unit cell lengths | 88.402, 88.402, 103.949 |
| Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
| Resolution | 40.676 - 2.501 |
| R-factor | 0.1752 |
| Rwork | 0.173 |
| R-free | 0.21480 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 3qkp |
| Data reduction software | HKL-2000 |
| Data scaling software | HKL-2000 |
| Phasing software | PHASER (2.8.3) |
| Refinement software | PHENIX (1.15.2_3472) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 50.000 | 50.000 | 2.590 |
| High resolution limit [Å] | 2.500 | 5.380 | 2.500 |
| Rmerge | 0.137 | 0.082 | 0.649 |
| Rmeas | 0.142 | 0.085 | 0.696 |
| Rpim | 0.033 | 0.020 | 0.243 |
| Total number of observations | 261786 | ||
| Number of reflections | 16320 | 1728 | 1566 |
| <I/σ(I)> | 7.2 | ||
| Completeness [%] | 97.7 | 96.2 | 95.6 |
| Redundancy | 16 | 17.6 | 7.2 |
| CC(1/2) | 0.998 | 0.773 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 7.8 | 295 | tris hydrochloride pH 7.8, magnesium acetate tetrahydrate, PEG 8000 and benzamidine |






