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6XEE

Crystal Structure of the PTP1B YopH WPD loop Chimera 4 apo form

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRL BEAMLINE BL9-1
Synchrotron siteSSRL
BeamlineBL9-1
Temperature [K]100
Detector technologyCCD
Collection date2019-01-31
DetectorADSC QUANTUM 315r
Wavelength(s)0.97946
Spacegroup nameP 31 2 1
Unit cell lengths88.402, 88.402, 103.949
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution40.676 - 2.501
R-factor0.1752
Rwork0.173
R-free0.21480
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3qkp
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHASER (2.8.3)
Refinement softwarePHENIX (1.15.2_3472)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0002.590
High resolution limit [Å]2.5005.3802.500
Rmerge0.1370.0820.649
Rmeas0.1420.0850.696
Rpim0.0330.0200.243
Total number of observations261786
Number of reflections1632017281566
<I/σ(I)>7.2
Completeness [%]97.796.295.6
Redundancy1617.67.2
CC(1/2)0.9980.773
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7.8295tris hydrochloride pH 7.8, magnesium acetate tetrahydrate, PEG 8000 and benzamidine

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