6XED
Crystal Structure of the PTP1B YopH WPD loop Chimera 3 bound to tungstate
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL9-1 |
Synchrotron site | SSRL |
Beamline | BL9-1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2019-01-31 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.97946 |
Spacegroup name | P 31 2 1 |
Unit cell lengths | 88.871, 88.871, 104.351 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 44.435 - 1.795 |
R-factor | 0.1581 |
Rwork | 0.157 |
R-free | 0.17900 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3qkp |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER (2.8.3) |
Refinement software | PHENIX (1.15.2_3472) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.860 |
High resolution limit [Å] | 1.795 | 3.880 | 1.800 |
Rmerge | 0.109 | 0.068 | 0.625 |
Rmeas | 0.112 | 0.069 | 0.659 |
Rpim | 0.026 | 0.016 | 0.206 |
Number of reflections | 44952 | 4720 | 4430 |
<I/σ(I)> | 7 | ||
Completeness [%] | 100.0 | 100 | 99.9 |
Redundancy | 16.4 | 18.5 | 9.8 |
CC(1/2) | 0.999 | 0.870 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.8 | 295 | tris hydrochloride pH 7.8, magnesium acetate tetrahydrate, PEG 8000 and benzamidine |