6XCL
Crystal Structure of human telomeric DNA G-quadruplex in complex with a novel platinum(II) complex.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | CLSI BEAMLINE 08B1-1 |
Synchrotron site | CLSI |
Beamline | 08B1-1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2019-02-07 |
Detector | MARMOSAIC 300 mm CCD |
Wavelength(s) | 1.0332 |
Spacegroup name | P 3 |
Unit cell lengths | 64.030, 64.030, 42.230 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 33.600 - 2.700 |
R-factor | 0.1938 |
Rwork | 0.191 |
R-free | 0.24320 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3t5e |
RMSD bond length | 0.009 |
RMSD bond angle | 1.157 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (1.18.1_3865) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 35.000 | 2.900 |
High resolution limit [Å] | 2.700 | 2.700 |
Number of reflections | 10637 | 2054 |
<I/σ(I)> | 14.28 | 2.51 |
Completeness [%] | 99.8 | 99.7 |
Redundancy | 5.8 | 5.8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6 | 285 | 100 mM KCl, 10 mM MgCl2, 50 mM MES (pH 6.0), 10% PEG 400 |