6X1E
Tubulin-RB3_SLD-TTL in complex with compound 5l
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL19U1 |
Synchrotron site | SSRF |
Beamline | BL19U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-12-17 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.97853 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 105.360, 157.742, 182.163 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 49.910 - 2.900 |
R-factor | 0.1717 |
Rwork | 0.170 |
R-free | 0.22420 |
Structure solution method | FOURIER SYNTHESIS |
Starting model (for MR) | 6br1 |
RMSD bond length | 0.003 |
RMSD bond angle | 0.545 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHENIX |
Refinement software | PHENIX (1.14_3260) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.950 |
High resolution limit [Å] | 2.900 | 2.900 |
Rmerge | 0.177 | 1.137 |
Rpim | 0.050 | 0.317 |
Number of reflections | 67407 | 3331 |
<I/σ(I)> | 15.7 | 3 |
Completeness [%] | 100.0 | 99.8 |
Redundancy | 13.3 | 13.6 |
CC(1/2) | 0.996 | 0.804 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.7 | 293 | 6% PEG 4000, 5% glycerol, 0.1M MES, 30 mM CaCl2, 30 mM MgCl2, pH 6.7 |