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6WV8

Takifugu rubripes VKOR-like C138S mutant with vitamin K1

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 24-ID-C
Synchrotron siteAPS
Beamline24-ID-C
Temperature [K]100
Detector technologyPIXEL
Collection date2017-08-09
DetectorDECTRIS PILATUS 6M-F
Wavelength(s)0.9791
Spacegroup nameP 21 21 21
Unit cell lengths55.167, 61.490, 167.211
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution34.570 - 3.010
R-factor0.2573
Rwork0.255
R-free0.29270
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2b3p
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHASER
Refinement softwarePHENIX (1.18_3855)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0003.050
High resolution limit [Å]3.0008.1303.000
Rmerge0.1300.0450.690
Rmeas0.1590.0550.850
Rpim0.0910.0310.487
Total number of observations30113
Number of reflections10986598562
<I/σ(I)>6.9
Completeness [%]93.988.398.9
Redundancy2.72.72.8
CC(1/2)0.9960.413
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1LIPIDIC CUBIC PHASE629525% PEG 400, 300 mM ammonium fluoride, 0.1 M MES pH 6.0

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