6WPM
Crystal structure of a putative oligosaccharide periplasmic-binding protein from Synechococcus sp. MITs9220 in complex with zinc
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | AUSTRALIAN SYNCHROTRON BEAMLINE MX2 |
Synchrotron site | Australian Synchrotron |
Beamline | MX2 |
Temperature [K] | 80 |
Detector technology | PIXEL |
Collection date | 2019-03-16 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.979 |
Spacegroup name | P 43 2 2 |
Unit cell lengths | 144.778, 144.778, 53.716 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 45.780 - 2.880 |
R-factor | 0.2102 |
Rwork | 0.208 |
R-free | 0.25390 |
Structure solution method | SAD |
RMSD bond length | 0.002 |
RMSD bond angle | 0.494 |
Data reduction software | pointless |
Data scaling software | SCALA |
Phasing software | PHASER |
Refinement software | REFMAC (5) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 53.420 | 2.980 |
High resolution limit [Å] | 2.230 | 2.880 |
Rmerge | 0.072 | 0.027 |
Rmeas | 0.038 | |
Rpim | 0.027 | |
Number of reflections | 13405 | 1253 |
<I/σ(I)> | 0.0694 | 30 |
Completeness [%] | 99.4 | 94.6 |
Redundancy | 3.8 | 2 |
CC(1/2) | 0.999 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 295 | Ammonium sulphate (2 M), PEG 3350 (20% w/v) |