6WND
Structure of the Rieske non-heme iron oxygenase GxtA with dideoxysaxitoxin bound
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-F |
Synchrotron site | APS |
Beamline | 21-ID-F |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2019-08-10 |
Detector | RAYONIX MX-300 |
Wavelength(s) | 0.9787 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 74.578, 96.976, 80.409 |
Unit cell angles | 90.00, 107.24, 90.00 |
Refinement procedure
Resolution | 41.470 - 2.180 |
R-factor | 0.1737 |
Rwork | 0.168 |
R-free | 0.20800 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6wnc |
RMSD bond length | 0.008 |
RMSD bond angle | 0.970 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHENIX |
Refinement software | PHENIX (1.17.1_3660) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 41.470 | 2.260 |
High resolution limit [Å] | 2.180 | 2.182 |
Rmerge | 0.090 | 0.755 |
Number of reflections | 56610 | 5402 |
<I/σ(I)> | 15.3 | 1.84 |
Completeness [%] | 99.4 | 94.59 |
Redundancy | 3.8 | |
CC(1/2) | 0.995 | 0.607 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | 0.3 M MgCl2, 0.1 M Bis-Tris pH 5.5, 25% v/v PEG3350, 15% v/v glycerol |