6WAK
A crystal structure of EGFR(T790M/V948R) in complex with LN3754
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-C |
Synchrotron site | APS |
Beamline | 24-ID-C |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-06-11 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.9792 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 72.472, 103.371, 87.249 |
Unit cell angles | 90.00, 101.24, 90.00 |
Refinement procedure
Resolution | 85.580 - 2.400 |
R-factor | 0.219 |
Rwork | 0.218 |
R-free | 0.22950 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6p1d |
Data reduction software | xia2 |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.17.1_3660) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 85.590 | 85.590 | 2.460 |
High resolution limit [Å] | 2.400 | 10.730 | 2.400 |
Rmerge | 0.150 | 0.063 | 0.775 |
Rmeas | 0.186 | 0.078 | 0.979 |
Rpim | 0.108 | 0.046 | 0.588 |
Total number of observations | 145758 | 1798 | 10686 |
Number of reflections | 48288 | 577 | 3551 |
<I/σ(I)> | 7.3 | 13.1 | 3 |
Completeness [%] | 97.6 | 97.7 | 96.7 |
Redundancy | 3 | 3.1 | 3 |
CC(1/2) | 0.959 | 0.983 | 0.311 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.5 | 298 | 25% PEG-3350, 0.1 M BisTris |