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6W7Z

RNF12 RING domain in complex with Ube2d2

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAUSTRALIAN SYNCHROTRON BEAMLINE MX2
Synchrotron siteAustralian Synchrotron
BeamlineMX2
Temperature [K]100
Detector technologyCCD
Collection date2014-11-14
DetectorADSC QUANTUM 315r
Wavelength(s)0.9790
Spacegroup nameP 1 21 1
Unit cell lengths48.441, 50.453, 54.375
Unit cell angles90.00, 99.72, 90.00
Refinement procedure
Resolution47.740 - 1.800
R-factor0.1795
Rwork0.178
R-free0.21080
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)SAD-phased structure of RNF12-Ube2d2 (undeposited model)
RMSD bond length0.002
RMSD bond angle0.530
Data reduction softwareXDS
Data scaling softwareAimless (0.5.29)
Phasing softwarePHASER
Refinement softwarePHENIX (1.13_2998)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]47.7401.840
High resolution limit [Å]1.8001.800
Rmerge0.0700.711
Rmeas0.0800.817
Rpim0.0390.397
Total number of observations99121
Number of reflections240991405
<I/σ(I)>12.3
Completeness [%]99.999.9
Redundancy4.14.1
CC(1/2)0.9980.813
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP28915-20% PEG 3350, 100-200 mM ammonium formate

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