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6VUF

Crystal structure of BRD4 bromodomain 1 with N-methylpyrrolidin-2-one (NMP) derivative 7h (4-(1-methyl-5-oxopyrrolidin-3-yl)-N-propylbenzenesulfonamide)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAUSTRALIAN SYNCHROTRON BEAMLINE MX1
Synchrotron siteAustralian Synchrotron
BeamlineMX1
Temperature [K]100
Detector technologyCCD
Collection date2017-05-05
DetectorADSC QUANTUM 210r
Wavelength(s)0.95370
Spacegroup nameP 1 21 1
Unit cell lengths36.030, 79.205, 46.819
Unit cell angles90.00, 92.82, 90.00
Refinement procedure
Resolution40.270 - 1.590
R-factor0.2183
Rwork0.216
R-free0.26940
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5dw2
RMSD bond length0.008
RMSD bond angle0.951
Data reduction softwareXDS
Data scaling softwareSCALA
Phasing softwarePHASER
Refinement softwarePHENIX (1.16_3549)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]46.7601.680
High resolution limit [Å]1.5901.590
Rmerge0.0790.642
Rpim0.0440.357
Number of reflections352735067
<I/σ(I)>10.31.9
Completeness [%]99.8
Redundancy4.2
CC(1/2)0.9970.765
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP277.150.2 M sodium nitrate, 35% PEG3350, 6% v/v ethylene glycol

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