6VTR
Crystal structure of G16S human Galectin-7 mutant
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | CLSI BEAMLINE 08B1-1 |
Synchrotron site | CLSI |
Beamline | 08B1-1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2019-02-19 |
Detector | RAYONIX MX300HE |
Wavelength(s) | 1.0332 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 54.010, 66.700, 71.430 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 48.750 - 2.300 |
R-factor | 0.2084 |
Rwork | 0.203 |
R-free | 0.25580 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1bkz |
RMSD bond length | 0.002 |
RMSD bond angle | 0.577 |
Data reduction software | MOSFLM |
Data scaling software | Aimless (0.5.27) |
Phasing software | PHASER (2.7.12) |
Refinement software | PHENIX (dev_2481) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 48.750 | 48.750 | 2.010 |
High resolution limit [Å] | 1.900 | 5.000 | 1.900 |
Rmerge | 0.068 | 0.022 | 2.377 |
Rmeas | 0.072 | 0.024 | 2.525 |
Total number of observations | 184406 | ||
Number of reflections | 19128 | 1258 | 1894 |
<I/σ(I)> | 20.41 | 71.55 | 0.86 |
Completeness [%] | 91.2 | 99.3 | 59.1 |
Redundancy | 9.641 | 8.905 | 8.844 |
CC(1/2) | 1.000 | 1.000 | 0.420 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8 | 295.15 | 0.1 M NaCl, 0.1 M Tris pH 8.0, 20 % PEG 3350, 17.5 % Glycerol |