6VMC
T4H2 T cell receptor bound to HLA-A2 presenting gp100T2L peptide (ILDQVPFSV)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 23-ID-D |
Synchrotron site | APS |
Beamline | 23-ID-D |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-06-18 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 1.03320 |
Spacegroup name | P 64 |
Unit cell lengths | 129.532, 129.532, 115.656 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 25.740 - 2.850 |
R-factor | 0.2002 |
Rwork | 0.197 |
R-free | 0.23850 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1tvh |
RMSD bond length | 0.002 |
RMSD bond angle | 0.446 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.13_2998) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.900 |
High resolution limit [Å] | 2.850 | 2.850 |
Rmerge | 0.197 | 1.182 |
Rmeas | 0.202 | 1.224 |
Rpim | 0.045 | 0.316 |
Number of reflections | 25782 | 1266 |
<I/σ(I)> | 26 | 3 |
Completeness [%] | 100.0 | 100 |
Redundancy | 19.8 | 14.9 |
CC(1/2) | 0.998 | 0.611 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8.5 | 296 | 18% v/v PEG10000, 16% v/v glycerol, 250 mM Tris pH 8.5, 60 mM sodium chloride |