6VLG
Crystal structure of mouse alpha 1,6-fucosyltransferase, FUT8 bound to GDP
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | AUSTRALIAN SYNCHROTRON BEAMLINE MX2 |
Synchrotron site | Australian Synchrotron |
Beamline | MX2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-11-03 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.9536 |
Spacegroup name | P 65 2 2 |
Unit cell lengths | 150.820, 150.820, 472.139 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 49.367 - 2.500 |
R-factor | 0.1844 |
Rwork | 0.182 |
R-free | 0.22730 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2de0 |
Data reduction software | XDS |
Data scaling software | Aimless (0.7.4) |
Phasing software | PHASER |
Refinement software | PHENIX (1.16_3549) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 49.370 | 2.540 |
High resolution limit [Å] | 2.500 | 2.500 |
Rmerge | 0.157 | 0.713 |
Rmeas | 0.164 | 0.772 |
Rpim | 0.049 | 0.279 |
Total number of observations | 1135283 | 28905 |
Number of reflections | 109145 | 4637 |
<I/σ(I)> | 9.5 | 2 |
Completeness [%] | 98.8 | 85.8 |
Redundancy | 10.4 | 6.2 |
CC(1/2) | 0.995 | 0.811 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.4 | 298 | 12% PEG 3350, 0.25 M NH4SO4, 0.1 M Tris, pH 7.4 |