6VFR
Crystal structure of human protocadherin 18 EC1-EC4
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | APS BEAMLINE 24-ID-C |
| Synchrotron site | APS |
| Beamline | 24-ID-C |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2016-06-29 |
| Detector | DECTRIS PILATUS 6M-F |
| Wavelength(s) | 0.9792 |
| Spacegroup name | C 1 2 1 |
| Unit cell lengths | 126.959, 176.942, 71.872 |
| Unit cell angles | 90.00, 101.42, 90.00 |
Refinement procedure
| Resolution | 19.900 - 2.790 |
| R-factor | 0.2376 |
| Rwork | 0.236 |
| R-free | 0.27230 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 6vfq |
| RMSD bond length | 0.014 |
| RMSD bond angle | 0.755 |
| Data reduction software | XDS |
| Data scaling software | Aimless |
| Phasing software | PHASER |
| Refinement software | PHENIX (1.10.1_2155) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 40.000 | 2.920 |
| High resolution limit [Å] | 2.790 | 2.790 |
| Rmerge | 0.083 | 1.240 |
| Rmeas | 0.094 | 1.410 |
| Rpim | 0.042 | 0.640 |
| Number of reflections | 38201 | 4506 |
| <I/σ(I)> | 10.2 | 1.4 |
| Completeness [%] | 97.2 | 91.4 |
| Redundancy | 4.8 | 4.6 |
| CC(1/2) | 1.000 | 0.830 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 296 | 13% (w/v) PEG 20 000, 0.1M MES pH 6.5, with 30% (v/v) ethylene glycol added as cryoprotectant |






