6V9E
The crystal structure of the 2009 H1N1 PA endonuclease wild type in complex with SJ000988632
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 22-ID |
Synchrotron site | APS |
Beamline | 22-ID |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-08-18 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 1.0000 |
Spacegroup name | I 4 2 2 |
Unit cell lengths | 91.052, 91.052, 134.042 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 38.960 - 2.400 |
R-factor | 0.2454 |
Rwork | 0.244 |
R-free | 0.27480 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5vpt |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | MOLREP |
Refinement software | PHENIX (1.17rc1_3605) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 64.380 | 2.490 |
High resolution limit [Å] | 2.400 | 2.400 |
Rmerge | 0.034 | 0.809 |
Rmeas | 0.038 | 0.908 |
Rpim | 0.017 | 0.403 |
Number of reflections | 11142 | 1145 |
<I/σ(I)> | 20.5 | 2.1 |
Completeness [%] | 98.8 | 99.6 |
Redundancy | 4.6 | 4.9 |
CC(1/2) | 1.000 | 0.812 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 291 | 0.1 M HEPES PH 7.8, 1 M AMMONIUM SULFATE, 10 MM MNCL2, 10 MM MGCL2, 0.5% PVP K15 |