6V8U
Kaiso (ZBTB33) zinc finger DNA binding domain in complex with a modified Kaiso binding sequence (KBS)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL12-2 |
Synchrotron site | SSRL |
Beamline | BL12-2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2014-03-18 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.97950 |
Spacegroup name | C 2 2 2 |
Unit cell lengths | 44.142, 183.624, 97.755 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 42.919 - 2.103 |
R-factor | 0.1753 |
Rwork | 0.172 |
R-free | 0.20360 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4f6m |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHENIX (1.9_1692) |
Refinement software | PHENIX (1.13_2998) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 42.920 | 2.178 |
High resolution limit [Å] | 2.103 | 2.103 |
Rmerge | 0.107 | 0.777 |
Rmeas | 0.112 | |
Number of reflections | 23073 | 1986 |
<I/σ(I)> | 17.6 | 2.83 |
Completeness [%] | 97.6 | 86.23 |
Redundancy | 11.1 | 6.6 |
CC(1/2) | 0.996 | 0.860 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5 | 295 | 0.02 M Calcium Chloride, 0.1 M Sodium Acetate, 30 % 2-methyl-2,4-pentanediol |