6V59
Crystal structure of the diheme peroxidase BthA Y463M variant from Burkholderia thailandensis E264
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-C |
Synchrotron site | APS |
Beamline | 24-ID-C |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-02-26 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 0.9791 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 49.970, 87.605, 184.170 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 48.230 - 1.593 |
R-factor | 0.1523 |
Rwork | 0.151 |
R-free | 0.17740 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6nx0 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER (2.7.16) |
Refinement software | PHENIX (1.16_3549) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 48.230 | 1.660 |
High resolution limit [Å] | 1.593 | 3.450 | 1.593 |
Rmerge | 0.095 | 0.060 | 0.482 |
Rmeas | 0.102 | 0.064 | 0.524 |
Rpim | 0.038 | 0.024 | 0.199 |
Number of reflections | 107369 | 11317 | 10070 |
<I/σ(I)> | 6.8 | ||
Completeness [%] | 98.8 | 99.1 | 94 |
Redundancy | 6.6 | 7 | 5.6 |
CC(1/2) | 0.996 | 0.884 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 298 | 100 mM Tris, pH 8.5, 160 mM magnesium chloride, 18% PEG 4000, 20% glycerol |