6V56
The crystal structure of the 2009 H1N1 PA endonuclease wild type in complex with SJ000985494
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 22-ID |
Synchrotron site | APS |
Beamline | 22-ID |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-03-22 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 1.0000 |
Spacegroup name | I 4 2 2 |
Unit cell lengths | 89.546, 89.546, 132.780 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 38.340 - 2.750 |
R-factor | 0.2447 |
Rwork | 0.244 |
R-free | 0.26200 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5vpt |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | MOLREP |
Refinement software | PHENIX (1.17rc1_3605) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 74.240 | 2.880 |
High resolution limit [Å] | 2.750 | 2.750 |
Rmerge | 0.066 | 0.945 |
Rmeas | 0.074 | 1.045 |
Rpim | 0.032 | 0.438 |
Number of reflections | 7294 | 947 |
<I/σ(I)> | 14.1 | 1.9 |
Completeness [%] | 99.7 | 99.5 |
Redundancy | 5.4 | 5.5 |
CC(1/2) | 0.998 | 0.652 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 291 | 0.1 M HEPES PH 7.8, 1 M AMMONIUM SULFATE, 10 MM MNCL2, 10 MM MGCL2, 0.5% PVP K15 |