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6V2B

Complex of double mutant (T89V,K162T) of E. coli L-asparaginase II with L-Asn

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU MICROMAX-007 HF
Temperature [K]100
Detector technologyPIXEL
Collection date2017-02-16
DetectorDECTRIS EIGER X 4M
Wavelength(s)1.5418
Spacegroup nameC 1 2 1
Unit cell lengths151.224, 62.578, 140.886
Unit cell angles90.00, 117.67, 90.00
Refinement procedure
Resolution26.550 - 2.050
R-factor0.1547
Rwork0.152
R-free0.20130
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3eca
RMSD bond length0.015
RMSD bond angle1.915
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0253)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]40.00040.0002.090
High resolution limit [Å]2.0505.5602.050
Rmerge0.0470.0140.512
Rmeas0.0570.0170.632
Rpim0.0330.0090.364
Total number of observations199695
Number of reflections7059638183449
<I/σ(I)>12.5
Completeness [%]95.799.194.6
Redundancy2.83.42.5
CC(1/2)0.9990.706
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP5.5298Crystals grown at 0.17 M sodium citrate (pH 6) and 17-18% (w/v) PEG3350. Soaked for 1-2 minutes (empirically determined for each crystal) in equivalent solution with 0.025% (w/v) glutaraldehyde. Finally transferred and soaked for 10-20 sec in solution containing 40% (w/v) PEG3350, 5 mM L-Asn, and 0.17 M sodium citrate (pH 5.5)

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PDB entries from 2025-06-11

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