6V2B
Complex of double mutant (T89V,K162T) of E. coli L-asparaginase II with L-Asn
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 HF |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-02-16 |
Detector | DECTRIS EIGER X 4M |
Wavelength(s) | 1.5418 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 151.224, 62.578, 140.886 |
Unit cell angles | 90.00, 117.67, 90.00 |
Refinement procedure
Resolution | 26.550 - 2.050 |
R-factor | 0.1547 |
Rwork | 0.152 |
R-free | 0.20130 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3eca |
RMSD bond length | 0.015 |
RMSD bond angle | 1.915 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0253) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 40.000 | 40.000 | 2.090 |
High resolution limit [Å] | 2.050 | 5.560 | 2.050 |
Rmerge | 0.047 | 0.014 | 0.512 |
Rmeas | 0.057 | 0.017 | 0.632 |
Rpim | 0.033 | 0.009 | 0.364 |
Total number of observations | 199695 | ||
Number of reflections | 70596 | 3818 | 3449 |
<I/σ(I)> | 12.5 | ||
Completeness [%] | 95.7 | 99.1 | 94.6 |
Redundancy | 2.8 | 3.4 | 2.5 |
CC(1/2) | 0.999 | 0.706 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.5 | 298 | Crystals grown at 0.17 M sodium citrate (pH 6) and 17-18% (w/v) PEG3350. Soaked for 1-2 minutes (empirically determined for each crystal) in equivalent solution with 0.025% (w/v) glutaraldehyde. Finally transferred and soaked for 10-20 sec in solution containing 40% (w/v) PEG3350, 5 mM L-Asn, and 0.17 M sodium citrate (pH 5.5) |