6UV2
Crystal structure of the core domain of RNA helicase DDX17 with RNA pri-125a-oligo1
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 19-ID |
Synchrotron site | APS |
Beamline | 19-ID |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-07-20 |
Detector | DECTRIS PILATUS3 S 6M |
Wavelength(s) | 0.97937 |
Spacegroup name | P 31 2 1 |
Unit cell lengths | 112.722, 112.722, 99.426 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 48.810 - 1.894 |
R-factor | 0.1704 |
Rwork | 0.170 |
R-free | 0.19080 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | DDX17-rU10 |
Data reduction software | HKL-3000 |
Data scaling software | HKL-3000 |
Phasing software | MOLREP |
Refinement software | PHENIX (1.14_3260) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 1.920 |
High resolution limit [Å] | 1.890 | 1.890 |
Rmeas | 0.100 | 0.487 |
Number of reflections | 58330 | 2922 |
<I/σ(I)> | 55.6 | |
Completeness [%] | 99.9 | |
Redundancy | 19.1 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 298 | 0.1 M HEPES pH 7.5, 40% PEG200 |