Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6UOK

Y271G DNA polymerase beta substrate complex with templating cytosine and incoming r8-oxo-GTP

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU MICROMAX-007 HF
Temperature [K]100
Detector technologyPIXEL
Collection date2019-06-28
DetectorDECTRIS PILATUS3 R 200K-A
Wavelength(s)1.54
Spacegroup nameP 1 21 1
Unit cell lengths54.687, 79.957, 100.832
Unit cell angles90.00, 97.64, 90.00
Refinement procedure
Resolution24.140 - 2.550
R-factor0.2285
Rwork0.224
R-free0.27870
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2fms
RMSD bond length0.004
RMSD bond angle0.616
Data reduction softwareHKL-3000
Data scaling softwareHKL-3000
Phasing softwarePHENIX
Refinement softwarePHENIX (1.16_3549)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]25.00025.0002.590
High resolution limit [Å]2.5506.8802.550
Rmerge0.1110.062
Rmeas0.1240.069
Rpim0.0620.031
Number of reflections4269314761430
<I/σ(I)>5.8
Completeness [%]99.999.999.7
Redundancy4.84.43.9
CC(1/2)0.9940.385
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP829119% PEG3350, 0.05M Imidazole (pH 8.0), 0.35 Sodium Acetate

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon