6UJI
Low resolution crystal structure (5.5 A) of the anthrax toxin protective antigen heptamer prepore D425A mutant
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 17-ID |
Synchrotron site | APS |
Beamline | 17-ID |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2014-11-01 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.0000 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 166.180, 144.247, 304.825 |
Unit cell angles | 90.00, 102.41, 90.00 |
Refinement procedure
Resolution | 44.830 - 5.500 |
R-factor | 0.253 |
Rwork | 0.251 |
R-free | 0.27800 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1tzo |
RMSD bond length | 0.007 |
RMSD bond angle | 0.980 |
Data reduction software | XDS |
Data scaling software | Aimless (0.7.4) |
Phasing software | PHASER (2.5.6) |
Refinement software | BUSTER |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 49.780 | 49.780 | 5.690 |
High resolution limit [Å] | 5.500 | 21.300 | 5.500 |
Rmerge | 0.091 | 0.033 | 0.612 |
Total number of observations | 155920 | 1786 | 15965 |
Number of reflections | 45836 | 641 | 4487 |
<I/σ(I)> | 9 | 26.9 | 2.2 |
Completeness [%] | 99.2 | 75.1 | 99.8 |
Redundancy | 3.4 | 2.8 | 3.6 |
CC(1/2) | 0.997 | 0.997 | 0.772 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 291 | 10% (v/v) ethanol, 0.1 M Tris |